Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ARR11(3)                         <---------ARR11(3)                         --------->AHL20(1)                      <---------AHL20(2)                      --------->AHL20(2)                    --------->AHL20(2)                  --------->AHL20(2)                 --------->ARR11(3)         <----------DOF2<---------AHL20(2)      ---------->ID1<---------AHL20(2)                                                           ---- -----At4g35610  <---------ARR11(3)                               <---------GLK1(1)         <-------- ------>RAV1(2)  <---------AHL20(1)                        ---------->DOF2           --------->YAB1 -----GT1------>ZmHOX2a(1)                     <----------DOF2    --------->GLK1(1) <---------ATHB12<   ctgtttgtgtccttttgaatatatatatatattcggctctgttcatatactttagtagcacaaaagagagttcccatcttgctccagtcatgttcttttg  186800                                                           <-----------RAV1(1)                                                   <---------ANAC55(1)                                                   <---------ANAC58                                    <---------ANAC46 <---------ZAT6    <----------DOF2       <-------GAMYB            <---------ANAC58 ------>ID1              <---------ANAC58          <---------ANAC46 --DOF2                  <---------ANAC58      --------->ARR11(3) ----------DOF2       <-----------RAV1(1)---------->DOF2  <---------YAB1                 <----------DOF2   ttctttcttttctcaagtctgtctatgtcgttgctcttgtgtagaaagagatttcgtgttattgttgttgttgtcaaacgctggagtttgtctttcggtt  186900                                                                                        --------->ANAC58                                                                                        --------->ANAC46                                                                                   <----------ID1                                                                                <---------YAB1                                                                              -------->ATHB1                                                                              <---------ICU4                                                                             <---------ATHB51                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                        <---------At4g35610                  --------->ICU4                                        --------->At4g35610               --------->AHL20(2)                                        ----------->RAV1(2)               --------->AHL20(1)                                      <-----------GT1             ----------->GT1<-----------GT1          --------->ICU4      ------->TEIL                      --------->ICU4--------->ATHB51      <------ZmHOX2a(1)       <-------TEIL          --------->GLK1(2)<---------AHL20(2) --------->ANAC58     ----------->GT1      <---------------AtSPL8    <---------ARR11(3)    <---------AHL20(2)   ------   <-----------RAV1(2)    <---------KAN4(2)         <---------ARR14(2)   --------->AHL20(2)  <------- <-----------HVH21        --------------->AtSPL8    --------->ARR14(2)   <---------AHL20(2)  --------   tctggtcaggaaataatgtggaatagggaatgtacatgtttcacctgtattcagtatctgtttgcaattagtaaattaaattattacaacaagccaagtg  187000                                            <---------LBD16                                   <---------ANAC58                                   <---------O2               --------->YAB1      <---------bZIP60(2)        <---------ANAC46           <---------bZIP60(1)       <------NtERF2               <---------TGA2(1)                     --------->ATHB12      ------>NtERF2                --------->TGA2(1)                     <---------ICU4     <---------ANAC46              --------->O2                          --------->ATHB51    <------NtERF2<---------YAB1    --------->bZIP60(1)                   -------->ATHB1    --------->ATERF1(1)            <---------ANAC58                     <---------ATHB51   <---------ATERF1(1)             <---------ANAC46                     --------->ICU4   <---------RAP2.3(1)            ----------->STF1                      <---------YAB1   <---------AHL20(2)  <---------DEAR3(1)  <-----------HVH21    <---------LBD16              --------->AHL20(1) --->ALFIN1   <---------YAB1     <---------TGA2(2)                      <---------AHL20(2) --O2--------->DEAR3(1)         ----------->TGA1                     <---------AHL20(2) <---------AHL20(2) ->O2<---------DEAR3(1)         ----------->HVH21                    --------->AHL20(2) --------->AHL20(2)   gaagacggcgtcgtttatcataaatgtcaaaccgatgacgtcttatcgggggagcatgagcattggactaaaaaattattgtcaatttgtttaaattgta  187100                <---------YAB1              --------->YAB1              -------->ATHB1              <---------ICU4             --------->AHL20(2)                                           --------->YAB1             <---------AHL20(2)                                           <---------ICU4             --------->AHL20(1)                                    --------->TOE2(3)             --------->ICU4                                        --------->TOE1(3)             <---------YAB1   <-----------GT1                    ------->TEIL   <---------PCF2--------->YAB1<-----------GT1        <-----------GT1    <---------ATHB12          <-   --------->ZAT18 <---------YAB1    <---------MYB52(1)     <------------CBF--------->ICU4 --------->YAB1   ttttgggccctgaaaattattataaatgaaatttagccccttaattttgtaagagtttacaacattgaaccctaaatcattatgttcccaaaatcaaaat  187200                                                                                          ------>NtERF2                                                                                         <---------DEAR3(1)                                                                                        --------->ATERF1(1)                                                                                        <------NtERF2                                                                                       <-----------HVH21                                                                                       <---------ATERF1(1)                                                                                       ------>NtERF2                                                                                      <---------O2                                                                                      --------->O2                                                                                      <---------DEAR3(1)                                                                                      --------->DEAR3(1)                                                                                  --------->At4g35610                                                                                  --------->ATERF1(1)                                                                                  <---------LBD16                                                                                  <---------At4g35610                                                     ----------->HVH21         ----------->HVH21                                                  <---------DEAR3(1)           --------->ATERF1(1)                                                 =================RAV          <------NtERF2                                              --------->SPL7                  <-----------TGA1  -----                                          <-------TEIL                        <---------RAP2.6(3)                                         --------->ARR14(1)                   <---------ATERF1(1)                                         <------ZmHOX2a(2)                    <-----------HVH21 <----                                        --------->AGP1----------->RAV1(1)    --------->DEAR3(1) -----                                        <---------ARR14(2)                   --------->RAP2.6(2)-----                                        --------->ARR11(3)                   --------->RAP2.3(2)<----                                        --------->ARR14(2)                 --------->ZAT2--------->DEAR3(1)                                        <---------ARR11(3)                 ------>MYB83<---------RAP2.3(1)                              --------->At4g35610----------->RAV1(2)       --------->At4g35610<------                            =====================HOX2a_HOX2a               ------>MYB46(1)<---------ATERF1(1)                            ====================HOX2a_HOX2a              --------->MYB46(3)<------NtERF2                            <------ZmHOX2a(1)<---------MYB52(1)        ------>NtERF2 --------->RAP2.3(1)           *TSS          ========================HOX2a_HOX2a    --------->bZIP60(2)--------->DEAR3(1)     ------>ZmHOX2a(1)   =======================HOX2a_HOX2a     <---------O2 --------->ANAC46-------- --------->ANAC46        <------ZmHOX2a(1)------>ZmHOX2a(2)     <---------ALFIN1  --------->DEAR3(2) ----------GT1 <---------ANAC46       ----------->ARR10         --------->O2 --------->RAP2.3(3)-----   ttcactcctcgagagtagcgagaagaaggaggagatgagcaagatccgttcgtctgcgacaatgccacatcgcgaccagccgtcaccggcgtcgcctcac  187300                                                              <---------ANAC46                                                          <---------ANAC58                                                          <---------ANAC58                                                          <---------ANAC46                                                       <<<<<<<<<MYB2                                                      <-------GAMYB                 --------->RAP2.3(2)      --------->ANAC58                               <---------DEAR3(1)             --------->RAP2.6(2)      --------->ANAC58                              <------NtERF2                 <---------At4g35610      --------->ANAC46                             ------>NtERF2 <---------ANAC46 --------->ZAT2    --------->ZAT6                                 --------->LBD16                --------->At4g35610 ---->ANAC46               --------->ZAT14         <---------ATERF1(1)          ---------->CDC5 -----TGA1a           <---------ARR14(2)          <---------DEAR3(1)          <-----------HVH21 ---->TGA1a          <------ZmHOX2a(1)            <---------ATERF1(2)  --------->ANAC46 ---->O2--------->ZAT14    --------->ZAT18       <---------LBD16<------NtERF2<---------At4g35610 -----O2<---------ZAT14    <---------ZAT18       --------->ATERF1(1)   --------->ANAC55(2)       ---- ---ALFIN1     <---------ZAT14                  <---------ATERF1(1) <---------ARR14(2)          ----- --->HVH21--------->At4g35610     --------->ANAC58--------->DEAR3(1)--------->ARR14(2)   --------->DEAR3(1) ---->bZIP60(1)--------->ZAT14    --------->ANAC58--------->ATERF1(2)  <---------ANAC55(2)  ---------   gtcgttacactcaactgtatagaggattgtgcgctcgagcaagactccctcgccggcgttgctggtgtcgaatacgtcccgctcagccgcatcgccgatg  187400                   --------->DEAR3(1)                 --------->ABI4(1)                 ------>NtERF2                --------->DEAR3(1)                --------->DREB2C(2)                ------->GAMYB                <---------ALFIN1               --------->DEAR4(2)               --------->ATERF1(1)               <------NtERF2               --------->MYB46(3)               --------->DEAR3(2)              --------->ABI4(1)              ------>NtERF2              <---------ATERF1(1)             <---------ALFIN1             --------->DEAR3(1)             --------->AtMYB61            --------->ARR11(3)            --------->MYB46(3)            ------->TEIL             --------->ATERF1(1)           ------>NtERF2                  <---------ARR11(3)      ------>NtERF2           <---------ATERF1(1)            --------->ARR14(2)      <---------ATERF1(1)          --------->ANAC58                <-----------ARR10      --------->DEAR3(1)          --------->ANAC58                <---------ARR11(1)     --------->RAP2.3(3)         --------->SPL7                   <---------ARR14(2)  --------->ANAC46         --------->ZAT18                 <---------CCA1(2)    --------->DEAR3(1)       <---------ARR14(2)                <---------ARR14(1) <---------ALFIN1                   <-----       --------->ARR14(2)              <---------ANAC58 <---------At4g35610                    <-----   <------ZmHOX2a(2)                   --------->ANAC55(2) <---------WRKY38(1)        --------->KAN4(2)   ===============================HOX2a_HOX2a      <-------PIF5 --------->ORA47(2)<---------ZAT2  --------->ARR11(3) <---------MYB52(1)<---------ANAC55(2) ---------->CDC5        --------->At4g35610 ------------------->TaNAC69(2)        <---------ANAC46 --------->ZAT2            --------->ZAT2 ------>GT1<------NtERF2               <---------ANAC58 --------->At4g35610       <---------At4g35610 >DEAR3(1)--------->ANAC46 ------>ZmHOX2a(1)       ------->PIF5------->GAMYB------>ZmHOX2a(1)------>NtERF2   gtaagatcgagtccgccaccgccgttctcctccattccctcgcgtatcttccacgagcagctcaacgccgactccgtcctcaccagctcattctctgcct  187500                                             <---------GLK1(1)                                     --------->ORA47(1)                                     ------>NtERF2                                    --------->DEAR3(1)                                    --------->DREB2C(2)                                    --------->DEAR4(1)                                    ----------->HVH21                                   <------NtERF2                                   --------->ORA47(2)                                   --------->RAP2.3(1)                                   --------->DEAR3(2)                                   --------->ATERF1(1)                                  ------>NtERF2                                  --------->At4g35610                                  --------->ABI4(1)                                  <---------ATERF1(1)                                  <---------At4g35610                                             <--                                 --------->DEAR3(1)                                              <---                                 <---------DEAR3(1)                                          --------                                 --------->ATERF1(2)                                        ---------                                 <---------ATERF1(2)                                        <--------                                 --------->RAP2.3(3)                                      --------->LBD16                                 --------->RAP2.3(2)                                     <---------ANAC46          ------>ZmHOX2a(2)     --------->ATERF1(1)                               <------ZmHOX2a(1)    --------->At4g35610         --------->DEAR4(2)                             --------->LBD16   <---    <---------At4g35610         --------->ERF1                   <---------ARR14(2)     <---------LBD16    <---------ZAT2              --------->RAP2.3(1)              <---------ARR11(3) <---------GLK1(1) ----ANAC58                    <---------ATERF1(1)          --------->AtLEC2  --------->DEAR3(1) <--- ----ANAC58--------->ZAT18    --------->ANAC46    ------>NtERF2  --------->ARR14(2) --------->GLK1(1)   tggctctgctgatcgcgctgtcgattcgactctcgccgccgacctaggtctccgacttgtccatgtagatacttcacgagccgaggaaatcgcggatacc  187600                                                                        <---------ANAC46                                                                      <---------DEAR3(2)     <---------At4g35610                                       <------NtERF2                      <-- -------MYB52(1)                                              ------>NtERF2    ------>ZmHOX2a(2) <--- --------TGA1                  --------->ANAC58   --------->ANAC58    <------MYB83               ---- ->GLK1(1)                     --------->ANAC58   --------->ANAC58    <------MYB46(1)            ---- >ARR14(2)                  ----------->HVH21   <---------ALFIN1     <---------DEAR3(1)    <--------- -ARR14(2)<---------YAB1    <---------SPL7     <---------REM1(2)    <--------P<------ZmHOX2a(2) <---- --------HVH21          ----------->HVH21    ----------->HVH21<---------SPL7 <---------ARR14(2) <---- ------RAP2.6(3)      ------>ZmHOX2a(1)      --------->ANAC46<---------ANAC46--------->ARR14(2)<-----   gtcatggcgctcatccttggactccttcgacggacgcatttactctcgcgacacgctctatcggcgtctggttggctcggatcgcttcagcctctttgcc  187700  Previous    Next  AGI:  At1g01500.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G19400.2); similar to unknown [Picea sitchensis] (GB:ABK24253.1); contains domain PTHR10996:SF1 (PTHR10996:SF1); contains domain PTHR10996 (PTHR10996) Range:  from: 185133    to: 186923    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g01510.1    Description:  AN (ANGUSTIFOLIA). similar to HPR (HYDROXYPYRUVATE REDUCTASE), glycerate dehydrogenase/ poly(U) binding [Arabidopsis thaliana] (TAIR:AT1G68010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39640.1); similar to angustifolia [Ipomoea nil] (GB:BAC58020.1); similar to hypothetical protein OsI_009584 [Oryza sativa (indica cultivar-group)] (GB:EAY88351.1); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; (InterPro:IPR006140); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 187211    to: 190056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version