Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               ------>ZmHOX2a(1)                                        ------>ZmHOX2a(2)                                       =============HOX2a_HOX2a                                      --------->AGP1                                      <---------GLK1(2)                                      <---------ARR11(3)                                          <--                                      <---------ARR14(2)                                          <--                                      --------->ARR14(2)                               --------->At4g35610                                      --------->ARR11(3)                            -----------------                                     <---------GLK1(1)                             --------->GLK1(2)                                    ----------->ARR10                              <---------ARR11(3)                               --------->ATHB12                                    --------->ARR14(2)                              <-------TEIL  --------->TOE2(3)                      <---------ARR14(2)                            --------->ARR14(2)                                     <-----------ARR10                            <---------ARR14(2) ---------->DOF2              <---------ARR14(2)   ---- --ARR14(2)              <---------ANAC46 ------>ZmHOX2a(1)                 --------->ARR14(2)   ---- ->ARR14(2)             <---------LBD16<------ZmHOX2a(2)                   <------ZmHOX2a(1)     ----   tctaggcgatttctcatcgggctagtagcggattcattgagatcctccttaaagcctctgtcttcatcacttcttgaggaaccagtatctgctccataaa  162200            ------>ZmHOX2a(1)          ----------------->AGL1         ---------->ID1      <----------DOF2 ---------HVH21                                      <---------GLK1(2) ---------TGA1                                      --------->ZAT2 <---------ANAC58            <----- ------>TaNAC69(2)                       ------>NtERF2<----------DOF2                        -------- ----->ANAC58             <----------ID1--------->DEAR3(1)         <---------ANAC46       --------->YAB1 ----->ANAC58    ----------->GT1        ----------->HVH21        <---------YAB1  ----------->RAV1(1) ----->ANAC46  --------->At4g35610<---------GLK1(2) <---------ZAT2 <---------ANAC58 ------->GAMYB----   cgtcaccgcttgtcctcatcggaaaaaaaaaacaaaaattctccgacgaagaccagcttctagggttttgcttgtttaaactgcaacagaaataataatc  162300                                                          --------->LBD16                                                      <---------ARR14(2)                                             <---------HSFB2a(1)                                             --------->HSFB2a(1)                                             --------->HSFC1(2)                                  ----                                             <---------HSFC1(2)                     --------->TOE2(3)                                            <---------ARR14(2)                      --------->TOE1(3)                                            <-----------ARR10                     --------->ARR11(3)                     --------->ICU4         --------->ARR14(2)                    --------->GLK1(2)             --------->GLK1(2)              ------->TEIL<---------LBD16           <---------ARR14(2)             --------->ARR14(2)             <---------ARR11(1)                    --------->ARR14(2) ----YAB1    <---------ARR14(2)            <---------CCA1(2)    --------->YAB1    <---------ARR11(3) ->YAB1  --------->YAB1        <---------GLK1(2)      --------->ARR14(2)         <---------ARR14(1) ----->TOE2(3)   --------->LBD16           <---------ARR14(1)   ----------->GT1  <---------CCA1(2)   cttgaattcaaacaaaatccgaaattatcaacaaattctctaatcgaatcttctccaatccgcgaatagtaacatggtagagcaaatcttaaaattttcc  162400                                   ----------------->AGL1                             --------->ANAC46                          --------->ZAT18                                     --------->ANAC58                          <---------ZAT14           --------->ANAC58          --------->ANAC58                        <---------WOX13(1)          --------->ANAC58          --------->ANAC46                      <---------ICU4         ---------->DOF2        <------ZmHOX2a(1)               <                      --------->ATHB12 --------->MYB52(1)         ----------->GT1   <---------HSFB2a(2)                     --------->ICU4----------------->AG        --------->CCA1(2)    --------->HSFB2a(2)                     <---------YAB1----------------->AGL2     <---------ARR11(3) ------->TEIL-------- -->ZmHOX2a(1)    ------------>ATHB5<---------------AGL15     --------->ARR11(3)<---------ALFIN1  <--   tagagactagttcaagagtttccatgattgcacagcatccaaaacgggaaagacaagacagagagatataggaaaatcaaacgcacctcgaagaagagtg  162500            <---------YAB1      <------NtERF2     <-----------TGA1     ------>NtERF2     <-----------HVH21    --------->TGA1a   --------->RAP2.3(1)  ------>NtERF2     --------->ARR11(3)  --------->LBD16   <---------ARR11(3)                                                 <---------AHL20(2) <---------RAP2.6(2)<---------AHL20(1)                                         ------>NtERF2 <---------LBD16    --------->AHL20(1)        --------->LBD16           ----------->HVH21      ------ ---------LBD16<---------YAB1          xxxxxxxxxxxxxxxx>smallRNA(s)     *TSS  --------->RAP2.3(3) --->GT1 --------->ICU4<---------AHL20(2)   <---------LBD16 <----------DOF2--------->ANAC46  <------- -------ARR14(2)  ------->TEIL    <---------ARR11(3) --------->GLK1(2)<----------DOF2  --------->AHL20(2)   attccggcgtcagtattatgaatattttttgggcaatttcttcgtctccggtgagaatcaagcttttagtctctttgacgcagccattttttaatattaa  162600                                                                                                -----                                   --------->YAB1                                               -----                                  <---------AHL20(2)                                          <------                              --------->AHL20(2)                                            -------->P                              <---------AHL20(2)                                        ---------->TaMYB80                          <---------AHL20(2)                                            --------->ARR14(2)                          --------->AHL20(2)                                       <---------LBD16                         --------->AHL20(2)                                        --------->LBD16                         <---------AHL20(2)                             <---------ANAC58--------->GLK1(2)                         --------->AHL20(1)                             <---------ANAC58<---------ARR14(2)     <---------ANAC46    <---------AHL20(1)                         <---------ANAC58   --------->GLK1(1)     ----------->GT1 <------ZmHOX2a(1)             ------------>CBF <---------ANAC58--------->LBD16 ---->DOF2        <---------At4g35610   ---------->DOF2         <---------DAG2    <---------LBD16 --YAB1           --------->At4g35610 --------->YAB1            <----------DOF2  <---------LBD16-----   aggagttttgtgaaaatttcagaggaatttatttaaataatcaaaagacttcgaacaatagctctacttttcttgcttcgttttcccgggaatctaccaa  162700                                                                                       <---------ANAC58                                                                                       <---------O2                                                                                       <---------ANAC58                                                                                       --------->ANAC55(2)                                                                                     --------->MYB52(1)                                                                          <---------WRKY18(1)                                                                          >>>>>>>>>>WRKY43                                                                          >>>>>>>>>>WRKY6                                                                          >>>>>>>>>>WRKY11                                            --------->HSFB2a(2)           >>>>>>>>>>WRKY26                                            <---------HSFB2a(2)           >>>>>>>>>>WRKY38 <------ZmHOX2a(1)                       <---------ARR14(2)              --------->WRKY12           - --->P                                   --------->ARR11(3)              --------->WRKY45----------->HVH21 ->MYB46(1)                 <---------TOE2(3)        <---------YAB1--------->WRKY18(1) <---------ANAC55(2) ---MYB111(1)         <---------ANAC46  <---------CCA1(2)         <-----------HVH21  <---------DOF5.7(2) ->MYB83     <---------ETT(2)         <---------------AGL15  -------->P  --------->WRKY38(1)    -----   ctaggaacaattagatcgacaatggagtttaagaattttgacatatctagaaactatgagtcttaccaggtcaagttgaccaagagataacgtgacgacc  162800                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                             ------>MYB83                                                                                           ----------                                                                                           <---------                                                                                           <---------MYB59                                                                                          -----------                                                                                          <----------                                            <------MYB83                                  <----------                                            <------MYB46(1)                          <---------------AtSPL8                                          <--------P                                 --------------->AtSPL3                 --------->AHL20(2)      <---------ANAC46                            --------------->AtSPL8        ----------->RAV1(1)             <---------MYB46(3)                          ---------->DOF2--       <----------ID1                   --------->ATHB12                  ----------->GT1 ----------- --------->AHL20(1)                <---------AHL20(2)                    --------->DAG2   <---------- -------->YAB1  --------->YAB1<---------MYB52(2)------>ZmHOX2a(2)      ---------->DOF2    ----------- ---->AtMYB61  --------->AHL20(2) <---------ATHB12          <-----------GT1   ---------->DOF2------>MYB46(1)   aaaaataatgcaacaaaataaaaatagtagtaactaatgaattggttggatcgattcgaatttaactgcatttgaaaggtgaaagttaaagtaccaaatt  162900         <---------AHL20(2)        --------->AHL20(1)        <---------ARR11(3)        --------->ARR11(3)        <---------AHL20(1)  <----------DOF2 --------ARR11(3) ----MYB46(1) ----MYB83 ----->MYB59 ----->AGL15                        ------>MYB83 ------AGL15                        ------>MYB46(1) ------>AGL1                       ----------->RAV1(1)  --------->ANAC46 -------AGL1                     --------->MYB46(3)   --------->ANAC46 -------AGL2                   XXXXXXXXXXXXXXXXXXXXX>MIR864-3P                 <------MYB46(1) ------->ARR11(3)       --------->ZAT2   --------->ARR11(3)                   <---------MYB46(3) ------>AGL3            --------->At4g35610        --------->ZAT14<---------ICU4                   -- -------AG              <---------At4g35610--------->TOE2(3)     <---------YAB1<------MYB83 <-------- ------>AG              <---------ZAT2   <---------ARR11(3)    --------->YAB1<---------ANAC46   <----   aggtctttgatatatttgtgtctcgctgctccaaaaccaacaataccttgaactacacacactattcatcatggccatggtgggtttagtttataacgat  163000                                                                               <---------CCA1(2)      --------->ANAC55(2)                                                    --------->YAB1      <---------ANAC55(2)                                              <---------TGA1a     ------->TEIL                                                      --------->TGA1a              < --------------->AtSPL8                                                <---------ANAC58           --- <---------------AtSPL3            --------->ARR11(3)              <---------HSFB2a(2)            <-- <---------------AtSPL8            <---------ARR11(3)              --------->HSFB2a(2)         ------ ----->TEIL                  --------->YAB1           <---------ANAC58 ============================== -TOE2(3)------->TEIL   ----------->GT1               <---------ANAC58 ============================== -----YAB1  <---------AHL20(2)<---------AHL20(2)      <---------ANAC46 <---------ANAC58    <---------   gaatgtgtacgtattttatacatgtattgtataatattatcttgtcaaaatagatggtgtgccatgttcccagacgtgctcataacttgaattcttttca  163100  Previous    Next  AGI:  At1g01440.1    Description:  extra-large G-protein-related. similar to extra-large G-protein-related [Arabidopsis thaliana] (TAIR:AT4G01090.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65830.1) Range:  from: 159856    to: 162572    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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