Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------>ZmHOX2a(2)                          --------->ATHB12                                      <---------ANAC58                         <---------YAB1                                   <---------YAB1                         --------->ICU4                           <---------MYB46(3)                       --------->YAB1                  <---------ANAC46   --------->ICU4                      <---------ZAT6       ------>ZmHOX2a(2)     <---------ATHB12 <---------LBD16                <---------TOE2(3)        --------->ARR11(3) --------->ANAC58    <---------ANAC58   <---------AHL20(2) --------->ICU4     <---------ARR11(3) --------->ANAC58   <---------ZAT2 ---->ZAT6     ---------->DOF2    ---------->DOF2<---------YAB1  --------->ICU4<---------At4g35610   tctattgaatttgagactaaagtagtgatgatcggaaaaagatgatctcttaccattctgtgaagcaatggttgtgatgtttgctggggaatcgacagag  158300                                               <---------ARR14(2)                                               --------->ARR14(2)                                               --------->GLK1(2)                                        <------NtERF2                                       <---------MYB46(3)                                       --------->LBD16                                       ------>NtERF2                                      <---------ANAC46                                     <---------LBD16                     <---------LBD16                                    --------->LBD16           --------->MYB52(1)                                  ------>ZmHOX2a(2)          <---------SPL7                                  <---------LBD16           ------>ZmHOX2a(2)                                  --------->ATERF1(1)     <---------ARR14(2)                                  ==============================HOX2a_HOX2a                                 ===============================HOX2a_HOX2a                                 <------ZmHOX2a(2)        --------->ARR14(2)                                --------->ARR11(3)       <------ZmHOX2a(1) --------->LBD16                                --------->GLK1(2)    <---------ANAC46  --------->ARR14(2)                                <---------ARR14(2) --------->LBD16     <---------ARR14(2)                               <------ZmHOX2a(1)   ------>NtERF2      <---------PCF2                               ====================================HOX2a_HOX2a                          ----------->HVH21   <---------GLK1(2)--------->SPL7     <---------DEAR3(1)               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<---------LBD16    <---------MYB46(3)        <------             <---------bZIP60(1)--------->ARR14(2)<---------LBD16  --------->ALFIN1       --------->ICU4   gctgaagtttgagtgatggcagtgagacctgaaggatccggcgggagagattccggcgaggatcgaacggtgggaaccggagagacggtggaattagtga  158400                                                                  <------MYB83                                                                  <---------MYB46(3)                                                                 <---------DEAR3(1)                                                               <-------GAMYB                                                              <---------ANAC58                                                           <---------WOX13(1)                                                          <---------ANAC58             <---------ARR14(2)                                                          <---------ANAC58             --------->ARR14(2)                                                 <------ZmHOX2a(1)<------MYB46(1)    <---------ANAC58                                          --------->ARR14(2)  <---------ANAC46  ------>MYB46(1)                                     --------->MYB52(1)  --------->ATHB12    ----------------->AGL1                        ---------->DOF2   <---------ARR14(2)  <---------ANAC58  ------>MYB83                      --------->YAB1----------->HVH21   <---------YAB1       ----------------->AGL3       --------->At5g28300      ---------->DOF2<---------TOE2(3) <---------AtMYB61   <---------ANAC58   --------->MYB52(1)===================================HOX2a_HOX2a        <---------ARR14(2) ---ZAT6             <------ZmHOX2a(2) <---------ANAC46 <---------AHL20(2)<------ZmHOX2a(1)      ----   tgagaaaacggtaagcgagaccgatcaaaaggaagaaagcgacggatttgaggaaaatttgattgcgttggtgagaggaaccaaatggggttccttcaat  158500                                                       --------->ZAT14                       <-------                                                       <---------ZAT14                       --------                           ------->TEIL                <------ZmHOX2a(2)                    <--------                        <---------ATHB12              <---------ARR11(3)                 <----------DOF2                   --------->TOE2(3)                  --------->ARR11(3)       <---------------AGL15           <---------ARR11(3)                        --------->At4g35610       --------------->AGL15 ----->YAB1--------->ARR11(3)                        <---------At4g35610      ----------------->AGL2   cttgatgctcttagatattaatctcaatgaatccattgcaattagagagaagagcagatcactgagttttttcaaatgtttccctaattagctttctgga  158600           <-------GAMYB          <---------ANAC46          <---------ANAC58          <---------ANAC58                                        ---------->ID1         <------NtERF2               <---------YAB1       ------>ZmHOX2a(1)        <------MYB46(1)            --------->YAB1      *TSS      <-----------GT1        <------MYB83              <---------YAB1       <------ZmHOX2a(2)      <--------P                <--------HAHB4        <---------ARR14(2)     <-------GAMYB              --------->YAB1        --------->ARR14(2)     <---------ANAC58           <---------ICU4        --------->ARR11(3)     <---------ANAC58   --------->ARR14(2)           <---------ARR14(1)    <---------MYB46(3)  <---------ARR14(2)        <---------At4g35610 --HSFB2a(2)           <------ZmHOX2a(1) ---------->DOF2------>ZmHOX2a(2) ->HSFB2a(2)   ---------->DOF2 --------->ICU4     --------->At4g35610 -LBD16<---------DEAR3(1)      <---------YAB1    --------->MYB52(1) <----------DOF2                 -   ggtttttggttggcgttgaaagcgaggaacttcatcattataaaaaagacacagcggatcctgtttttttctttttttctcagaagtactaaaacatgtt  158700                                                                              <---------ANAC58       <-----------GT1                                                        <---------ANAC58      --------->AHL20(2)                                                 <---------ANAC58   <---------ICU4                                                        <---------ANAC58   <--------HAHB4                                                        <---------MYB46(3)   --------->YAB1                        <---------At5g28300           <-----------HVH21   --------->ATHB51           ------->MYC3                             <-------GAMYB <---------AHL20(2)   -------->HAHB4             ------->MYC2                            <---------DEAR3(2)   <--------ATHB1             <-------MYC2                <----------DOF2--------->MYB52(2)        <-  --------->ICU4              <-------MYC3          <-----------GT1  <---------At1g77200           --  <---------YAB1           <---------ANAC58    <------------CBF      <---------DREB2C(2)         ----  <---------ATHB51         <---------AtLEC2  <---------YAB1         --------->DDF1  --------->AHL20(2) -------->YAB1             <---------ANAC58 --------->At5g28300   <-----------RAV1(1)--------->AHL20(2)   agtaataattaactcgagtttttttgtttgcatgtgtttgaattactgtaattgtttccactttgtttatgtcggtcgtggcttcatttaatttgtggag  158800                                       <---------YAB1                                     --------->TOE2(3)                              --------->MYB59                          <---------ICU4                          --------->ATHB12                                            <---------ZAT18           ----------->GT1--------->YAB1<---------ICU4                                <---------ZAT14          >>>>>>>>>TBF1   -------->HAHB4--------->ATHB51     --------->YAB1        <---------ANAC46      <---------At4g35610--------->ICU4--------->ICU4        --------->AHL20(2)  <---------ARR14(2)      --------->At4g35610<---------YAB1<---------ATHB51  <---------YAB1          --------->ARR14(2) --------ARR11(3)        <---------ATHB12          <---------TOE2(3)             --------->GLK1(2) ------->ARR11(3)       <---------TOE2(3)         ---------->DOF2        --------->DAG2 ------->ARR10     --------->GLK1(2) --------->YAB1<---------TOE1(3)    ---------->DOF2 ------->TEIL<   agatattcagaagaagaaaataatctaatgattaggcatccataattgtttttaaagttacaattatacaactgtaaagcgcgaatcgtgtacttgttgt  158900                                     --------------->AtSPL8                                   <---------bZIP60(2)                                ----------->HVH21                            --------->ANAC55(2)                            <---------ANAC55(1)                                                     <                            <---------ANAC55(2)                                                     <                            <---------ANAC58                                                        -                            <---------ANAC58                                                        <                            <---------ANAC46                                                        -              --------->ANAC58  <----------ARF1   --------->AHL20(2)                               --              --------->ANAC58 <-----------HVH21  <---------AHL20(2)                               --         --------->ATHB12  <---------LBD16        <---------ICU4                           <---------TOE2(3)        --------->ICU4 <----------DOF2            --------->ATHB51                  <----------------        <---------YAB1 ==============================================================================MADS_MADS      <---------ICU4   --------------->AGL15     --------->ICU4                     <----------------      --------->YAB1   <---------------AGL15   --------->YAB1 --------->ETT(2)      <---------------- ----------DOF2       <-----------------AGL2  --------->AHL20(2)    <------ZmHOX2a(1)<---------------AGL15   ctctttaaacatgattaagccattgctattacgggtgacatggtaccattaattatttccaacgtagacaggattacagtaatctctacatttatggaaa  159000 ---------ANAC55(2)                                                        <---------ICU4 ------MYB83                                                               --------->YAB1 ---------->GT1                                                        --------->AHL20(2) ------MYB46(1)                                                        <---------AHL20(2) -------->ANAC55(2)                                                   <---------WOX13(1)         ---- ------->MYB59                                 <------ZmHOX2a(1)--------->ATHB12<---------ANAC55(2) ------->MYB46(2)                --------->ANAC58      ------>ZmHOX2a(1)  --------->ICU4<------ZmHOX2a(1) -AGL1                           --------->ANAC46 <------MYB83  <---------AHL20(2)   <-----------RAV1(2) -AGL3                           --------->ANAC58 <------MYB46(1)   --------->ATHB12 <---------LBD16 -AG                      --------->WOX13(1) <---------TOE2(3) --------->ICU4   --------->ANAC55(2)   ttaggtgattagtttgtatttgtagtgtctatcaaacgaaactcgataaggatggtcctacagtatttattgattaattatcacttatcaggagcaaaga  159100                                                                     ----------->GT1                                                           <---------MYB46(3)                             ---------->DOF2           <---------AHL20(2)                       -----                           <---------MYB52(2)         --------->AHL20(2)                       <----- ----->CCA1(2)    <----------DOF2      --------->ARR11(3)  --------->ATHB12   --------->ZAT6   ------   tagagacttgttctctctctcttttttcaactaaagacagagacctcgcacttagatttaatggttgaaacttgtaactaaaactacttgtgagtatata  159200  Previous    Next  AGI:  At1g01430.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G01080.1); similar to unknown protein Cr17 [Brassica napus] (GB:AAX51387.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 156801    to: 158655    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version