Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------AHL20(1)    <-----------GT1                                                       <        --------->ARR11(3)    <---------AHL20(2)                                          --------->AHL20(2)        --------->AHL20(1) <---------AHL20(2)<----------DOF2                             <---------ARR11(3)       --------->AHL20(2)<---------YAB1    ---------->ID1                                <---------AHL20(1)   <---------AHL20(2) --------->AHL20(2)  <-----------GT1                        <---------YAB1     -   --------->AHL20(2) <---------AHL20(2) <<<<<<<<<<GT-3b                      --------->ICU4        - ----->AHL20(2)     <----------DOF2  <---------AHL20(2)            --------->AHL20(2)    --------->AHL20(1) ---->AHL20(2)--------->ARR11(3) <----------DOF2         --------->ARR11(3)   <---------ATHB51      <   aaaaaataaatatatagaacttcttttattattttctttttatttttctttttcaattggatattgtttttatataagaaattatgaacaaaatatttag  152700  --------->TOE1(3)  --------->YAB1                                                             ----------->RAV1(1)  --------->TOE2(3)                                                      ------>MYB83       --------- -----------ARR10                                                   <-----------GT1--------->YAB1   - -------->GLK1(2)--------->WOX13(1)       <------ZmHOX2a(1)     --------->AHL20(2)<-------TEIL    --- -------->ARR11(3)                      --------->MYB59  <---------ALFIN1------>MYB46(1) <-------TEIL ---------ARR11(3)               <-----------------AG --------->ANAC46  --------->WOX13(1)  <--------   aaaatcttaacgagaaaatcaatccaacttatatatacaaattaggaatacaaaacccctcactctataaataccaatccaacattcatggttcatctcc  152800                           --------->ICU4                           <---------ATHB51                           <---------ANAC58                       --------->AHL20(2)                             <-------GAMYB                     ------>ZmHOX2a(1)                           --------->ANAC46                    --------->TOE2(3)                           <-----------RAV1(2) >At4g35610   <---------AHL20(2)                         ----------->RAV1(1)        --------->ICU4 -------->ANAC46    --------->TOE1(3)                 --------->ANAC46<---------ANAC58         ------ ------>AtLEC2--------->AHL20(2)            --------->YAB1 <---------ALFIN1         <---------ATHB12 -At4g35610   <---------AHL20(1)       ------------>CBF  ===================RAV   <---------ICU4   atacacaattgactaattaattccttaaaattatggagagcatcaatgacaaaactcagccacataccaggcgcttgcagagactaatgactagttccga  152900                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                        <---------At4g35610                                       <--                                        --------->At4g35610                                       <--                                      <-----------RAV1(2)                                       <----                                    <-----------HVH21                               --------->GLK1(1)                                   <------MYB83                                     <---------GLK1(1)                                  --------->MYB59                        <---------MYB52(1)     -----                                  <---------MYB46(3)                   <---------ZAT6------>ZmHOX2a(2)                                  --------->MYB46(2)                   <---------ANAC58        ------                                 <---------MYB55(1)                    <---------ANAC58    <---------                                 <--------P                   ---------->TaMYB80   --------->ARR11(3)                                <---------MYB52(1)            <---------ARR14(2)   <---------AGP1 ---      <---------bZIP60(2)    ------>ZmHOX2a(1)                <---------KAN4(2)    <---------ARR11(3)   ----------->HVH21       ------>ZmHOX2a(2)                  --------->ARR14(2)  <---------CCA1(2)<- --->LBD16          <----------DOF2<------MYB46(1)         <---------ANAC46----------->ARR10 --------   agaaactgacatggacgattttcttttgatcctcggtaggtcagatgaagtccctaagtttgcgaatatactagcgttagatttggatctcttcgtcata  153000                           <----------DOF2 <---------YAB1          <---------DEAR3(2) -------->TOE2(3)    --------->ANAC46 --------ICU4        <---------ANAC58<---------GLK1(1) ------->ATHB12      =================bZIP_DOF                                                      - ------->YAB1        <---------TGA1a--------->ARR14(2)                                              < -------ATHB12       --------->bZIP60(1)     ---------->TaMYB80                                 <---- -------YAB1         <---------bZIP60(1)<---------LBD16                                       ------- -----ICU4           <---------ANAC58--------->CCA1(2)                                    <---------ICU4 ---->YAB1           <---------O2   <---------ARR14(2)                                   <---------YAB1 --->ICU4            --------->O2   <---------ARR11(3)                                   --------->ICU4 --TGA1              --------->TGA1a--------->ARR14(3)                               --------->ARR11(3) ------>ICU4        --------->SPL7  <---------ARR14(3)                        --------------->AGL15 < -------HAHB4    <---------ANAC58   --------->ARR11(3)                ------>ZmHOX2a(1)--------->YAB1 ->YAB1          <---------ANAC58 ----------->ARR10            ------------>CBF   ----------->TBP----   atcattagagactaagtaggcttacgtcgcttcatgaagatattcggaatatcagacgatatcaacacaatccttctctaccctatatatcatgatgaga  153100                                                                                                    <                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                               <-----                                            --------->ANAC58                                  -------          <---------YAB1               ----------->HVH21                                      -------        <---------ICU4                 <------NtERF2                                          -------       --------->ICU4                 <-----------TGA1                                        <------       --------->GLK1(2)             --------->bZIP60(1)                    --------->GLK1(2) -------   <------ZmHOX2a(1)                 <---------bZIP60(1)                 --------->ANAC46    <------- -------->HSFB2a(2)                  <---------ANAC58                    --------->ANAC58    -------- ---------HSFB2a(2)           --------->ATHB12                           --------->ANAC58 <---------- -----GLK1(2)                <---------YAB1 --------->ANAC58      --------->REM1(1)      --------->bZIP60(2) ---->ARR10              <------NtERF2<-----------HVH21          <-------TEIL            <---------CCA1(2) ---------HSFC1(1)    <---------LBD16<---------ANAC58            ------->TEIL    -------------------- ----->GLK1(2)      ------->TEIL    ---------->ID1           --------------->AtSPL8 <-----------GT1 <   ttctaggagattatgactcatgaacgcggctatgatttggcgtcacaagtactaaacatttgcaacgtacatcacaagaaactgttttgccatatcacgt  153200      <-----------RAV1(1)    <---------ANAC55(2)    --------->ANAC55(2) <---------MYB52(1)                  <---------ANAC46 -----------HVH21                    <---------ANAC55(2) ------>DEAR3(2)                     <---------ANAC58 ----->SPL7                          --------->ANAC55(2) --->TEIL                            <---------ANAC58 ----SPL7<---------AtMYB61           --------->bZIP60(1)                                            - -->ANAC58                           <---------bZIP60(1)                                            - -->ANAC46<------MYB83            <---------MYB52(1)                            ---------->DOF2   <-- -->ANAC58<------MYB46(1)       <---------MYB46(3)                          <---------ANAC58   <----- ---ANAC55(2)                --------->MYB52(1)                        <---------ICU4         ------- -->ANAC55(2)                ------------>AtMYB77         --------->YAB1    <---------ANAC46  ------- --------AtSPL3              <---------DOF5.7(2)    ----------->GT1    --------->ATHB12     <-------- ------->AtSPL3            --------->DOF5.7(2)    ---------->DOF2     <---------YAB1        <-------- -HVH21 <--------P       <---------YAB1         --------->ANAC58 <---------At4g35610    <---------GLK1(1) --->TaNAC69(2)       ----------->HVH21         --------->ANAC58 --------->At4g35610    --------->GLK1(1) -----------TGA1      ----------->TGA1<-----------TGA1    <-----------GT1   <---------ANAC58---------   accgtcacttgttggtcttgtcgagtgacgataacggttgcgtcatactcaagaaagttataacaatagctgatgatttcttgaaagatgaattccttga  153300                                                             ------->PIF4                                                             ------->MYC3                                                             <-------MYC4                                                             <-------MYC3                                                             <-------MYC2                                                             ------->MYC2                                                             <-------PIF4                                                             ------->PIF5            --------->ANAC58                --------->HSFC1(2)         <---------ZAT2                     <---------HSFB2a(1)       --------->ANAC46                     --------->HSFB2a(1) <---------ANAC58 ----->MYB46(1)                             <---------HSFC1(2)  <---------ANAC58 ----->MYB83--------->ANAC58              <---------GLK1(2)  <-------PIF5 -------MYB59                    --------->ANAC58            ------->MYC4 ----WRKY18(1)      --------->ANAC58     <------ZmHOX2a(1)  --------->ANAC55(2)             --------- ---->HVH21<---------ZAT18       --------->ANAC46           <---------ANAC55(2)             --------- -->WRKY12<---------ALFIN1       --------->ANAC58          ------------>OsbHLH66            --------- -ANAC58 --------->ZAT14     --------->ANAC58             <---------ALFIN1                ----------- -ANAC58 --------->ZAT2      --------->ANAC58             <------------OsbHLH66           --------->AtMYB61 ------------>WRI1  --------->ANAC58   <---------TOE2(3) <---------ZAT2          ---------->DOF2   <-   cctaatcgcacagcacgctcactcgctaagcatgcacgacttaggaatctccctaatccagcacgtgcttgagcttgattttacaaagaaaaccacacaa  153400               ------->PIF5               <-------MYC3  ---------->DOF2   --------->MYB52(1)                      --------->At4g35610 >ANAC58       ------->MYC2                                 <---------At4g35610 >ANAC46       <-------MYC2                                ------->GAMYB >ANAC58       ------->MYC3                   <---------ETT(2)      <---------YAB1  <---------ANAC58 >RAV1(1)<----------DOF2                      --------->ETT(2)  --------->ARR11(3)  <---------ANAC58< ---------ID1  <-------PIF5          <---------TOE2(3)  --------->MYB52(1)--------->At4g35610      <-   gacgacaagcgcttgcacgagctaatggctgagtttgatgaggttctctcgacatcagtaacagcagatgttgataagctccataagcttgcctcgaagc  153500                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                            --------->GLK1(2)                                                                           --------->GLK1(1)                                                                           <---------GLK1(1)                                                                           <---------HSFB2a(1)                                                                      <---------TOE2(2)                                                                      <---------TOE1(2)                                                                     ------>ZmHOX2a(1)             --------->GLK1(1)                                      --------------------->WRI1       --------->GLK1(2)                               --------->ATHB12 <------ZmHOX2a(1)      <---------GLK1(2)                               <---------YAB1--------->TOE2(2) ---------ZAT6------>ZmHOX2a(2)--------->YAB1         --------->ICU4--------->TOE1(2)   <---------ETT(2) --------TOE2(3) <----------DOF2                    --------->YAB1<---------YAB1--------->LBD16 <----   taatgttagattctgatctctttttcgagtttgtcataacaagacgaggctcgctcatgattcaaattatcctaggaaaatccgaagaagtcgaccaagt  153600  Previous    Next  AGI:  At1g01410.1    Description:  APUM22 (ARABIDOPSIS PUMILIO 22); RNA binding / binding. similar to binding [Arabidopsis thaliana] (TAIR:AT5G64490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67257.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Pumilio RNA-binding region; (InterPro:IPR001313); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 153113    to: 154198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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