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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
--------->
ANAC58
-
--------->
ANAC46
<
--------->
ANAC58
<---
--------->
ANAC58
--------
--------->
AtMYB61
<---------
AHL20(1)
------->
GAMYB
<---------
AHL20(1)
--------->
MYB46(3)
<---------
ARR11(3)
-------->
P
--------->
AHL20(1)
--------->
ANAC58
--------->
ARR11(3)
--------->
ANAC58
--------->
AHL20(2)
<-
--------->
ETT(2)
--------->
ANAC46
--------->
YAB1
<-------
<---------
ETT(2)
---------->
DOF2
--------->
AHL20(2)
----
<---------
ANAC58
----------->
GT1
------->
GAMYB
--------->
ANAC46
--------->
ARR11(3)
<---------
ANAC58
----------->
GT1
--------->
WOX13(1)
--------->
ANAC58
<-------
<---------
ANAC46
--------->
YAB1
<------
ZmHOX2a(2)
----------->
RAV1(1)
--------->
AHL20(1)
agtaagacagtgccttgcgctatcgacaatgggaatgtagaaaaacaatggatcaatcgccaaagcaaccacacaagcaaataaaaatattttgttccag
134900
--------->
GLK1(2)
--------->
ARR14(2)
------->
TEIL
<---------
ARR14(2)
----------->
GT1
--------->
LBD16
--------->
ARR14(2)
-------->
HSFB2a(2)
<---------
ARR14(2)
---------
HSFB2a(2)
--------->
YAB1
--------->
ARR11(3)
------
ARR14(2)
<---------
YAB1
<---------
HSFC1(2)
------>
ZmHOX2a(2)
--------->
AGL1
--------->
LBD16
--------->
HSFC1(2)
<------
ZmHOX2a(2)
--------
LBD16
--------->
TOE2(2)
<---------
ARR11(3)
<---------
ARR11(3)
----------
AGL1
<---------
ANAC46
--------->
ZAT6
<------
ZmHOX2a(1)
----->
ARR14(2)
<---------
LBD16
--------->
LBD16
<---------
ANAC58
----------->
HVH21
<-----
----------
AGL2
------>
ZmHOX2a(1)
<---------
ANAC46
<---------
ANAC58
------>
ZmHOX2a(1)
<-----
ttctggagaaacgaatcctgcgggtttatgatgttcttccgagtaacactagatgtttccttgtggtcaggatccttatgtgaagggaaactcaatggct
135000
--------->
TOE2(3)
<------
ZmHOX2a(1)
<---------
HSFB2a(2)
<----------
DOF2
<---------
At4g35610
--------->
ARR14(2)
<---------
ARR11(3)
--------->
YAB1
--------->
REM1(1)
----
ANAC58
--------->
ARR11(3)
--------->
TOE2(3)
<---------
ANAC58
----
ANAC58
<-----------
GT1
---------->
DOF2
--------->
HSFB2a(2)
<---------
ANAC58
--
tcttgaatccccattttacattcttgaaaactctatctaaagaaggtctagcttttcttccataaccatattcagaggataatggtttgccttcatcttt
135100
------>
MYB83
------>
MYB46(1)
--------->
AtMYB61
<---------
MYB59
<---------
MYB46(2)
<---------
MYB111(2)
--------->
MYB46(3)
<---------
MYB111(1)
-------->
P
--------->
MYB46(3)
<---------
MYB111(1)
<---------
MYB46(2)
<---------
MYB111(2)
<---------
MYB52(2)
<---------
HSFB2a(2)
--------->
HSFB2a(2)
<---------
ARR11(3)
<---
<---------
ARR11(3)
--------->
ARR14(2)
----
--------->
TOE2(3)
--------->
ARR11(3)
<----
<---------
MYB59
--------->
WOX13(1)
<---------
GLK1(2)
-------->
P
-------
--------->
TOE1(3)
<---------
ATHB12
--------->
ARR14(3)
--------->
TOE1(3)
----->
TEIL
--------->
YAB1
----------->
GT1
<---------
ARR14(3)
--------->
TOE2(3)
gaacctaaacaaaatcat
aagaaaatgagatagtagaaaaaatcattcaactatgaactgttttcaagattttctgtaactaccaaccttacacgattat
135200
--------->
AHL20(1)
<---------
AHL20(2)
--------->
TOE2(3)
--------->
YAB1
------>
ZmHOX2a(1)
<---------
bZIP60(2)
----------->
HVH21
--------->
AHL20(2)
<----------
DOF2
<---------
MYB59
===========================
bZIP_DOF
<----------
DOF2
<---------
TGA1a
<---------
YAB1
================================
HOX2a_HOX2a
<---------
CCA1(2)
=====================
bZIP_DOF
------
ICU4
<---------
ALFIN1
------>
ZmHOX2a(2)
<---------
O2
<---------
YAB1
----->
YAB1
--------->
At4g35610
--------->
ARR11(3)
<---------
ANAC58
--------->
YAB1
-----
YAB1
<---------
At4g35610
<---------
ARR11(3)
<---------
ANAC58
--------->
YAB1
-->
YAB1
--------->
At4g35610
<---------
At4g35610
----------->
TGA1
--------->
YAB1
---
catggctaaatgccatcagccaaacccttgtatatttcaactgatctttcgcttacagggtgacgagtcctaacattataataagaaccaaaacttaaga
135300
<---------
YAB1
--------->
ICU4
------>
MYB83
<-------
TEIL
--------->
MYB52(1)
------------>
CBF
------>
MYB46(1)
*
TSS
<---------
ATHB12
<---------
MYB111(2)
<---------
ANAC58
<---------
MYB46(2)
<---------
ANAC55(2)
<---------
MYB111(1)
<---------
ANAC55(1)
<---------
MYB59
<---------
ANAC46
--------->
ANAC58
<---------
YAB1
--------->
ANAC55(2)
--------->
ANAC58
------------>
CBF
<---------
ANAC58
--------->
AHL20(2)
--------->
ANAC58
---
<---------------
AtSPL8
--------->
YAB1
--------->
ANAC58
<-------
--------------->
AtSPL3
<---------
ATHB12
--------->
ANAC46
<------------
CBF
<---------
ICU4
--------->
WOX13(1)
--------->
ANAC55(1)
<-------
--------->
ATHB12
------------>
CBF
--------->
ANAC46
----------->
TBP
<-------
<---------
YAB1
--------->
LBD16
--------->
YAB1
<---------
ANAC55(2)
<---------
ANAC46
------>
TOE1(2)
--------->
ICU4
--------->
YAB1
------------>
CBF
--------->
ANAC55(2)
<-----------
RAV1(1)
catacgaattcttctacatgat
tacgtacaatgataatccccaataccaattaaaaataagcaagtagacacctaactacaaatacaattgtgttgtgtg
135400
----------------->
AGL1
--------->
ZAT6
------>
MYB83
<-----------
GT1
------>
MYB46(1)
<---------
MYB111(2)
---
================================================================================
<---------------
AGL15
<---------
MYB46(2)
------>
ZmHOX2a(1)
--------------->
AGL15
<---------
MYB55(2)
--------->
ARR14(2)
<---------
ANAC58
<---------
MYB52(2)
<---------
ARR14(2)
--------->
AHL20(2)
<---------
MYB111(1)
------>
MYB83
---
<---------
AHL20(2)
----------->
GT1
<---------
MYB59
----------------->
AG
---->
TEIL
<---------
ANAC58
--------->
WOX13(1)
--------->
TOE2(3)
----------->
GT1
--
ANAC58
<----------
DOF2
--------->
GLK1(2)
--------->
MYB55(1)
------>
MYB46(1)
---
--
ANAC46
<---------
AHL20(2)
--------->
TOE1(2)
--------->
AtMYB61
<---------
MYB59
----
--
ANAC58
<---------
ICU4
--------->
DAG2
--------->
GLK1(2)
--------->
ANAC46
=====================
tatgtgtttttaaatatttctttcttgaaaaggttaattagagaacctagaatcagtcaatttccacctaacattagattataccaaatcctgtaattcc
135500
--------->
ANAC58
--------->
ANAC58
<---------
AHL20(2)
------>
ZmHOX2a(1)
--------->
AtMYB61
<---------
GLK1(1)
--
--->
MYB83
--------------->
AGL15
--------->
GLK1(1)
----
============================
MADS_MADS
--------->
ANAC58
----
--->
MYB46(1)
--------->
AHL20(2)
--------->
ANAC58
----
----->
P
<-----------------
AGL3
--------->
CCA1(2)
<---------
WRKY18(1)
-->
ZmHOX2a(1)
<---------
ATHB12
--------->
YAB1
<<<<<<<<<
CBP60g
--------->
WRKY38(1)
===========================
MADS_MADS
---------->
DOF2
<<<<<<<<<
SARD1
--------->
WRKY12
tacccattcctgctcaataaatggaaaccacacgaacaacttaaaaacactgttcatcaaagataagaaatccaaatttcaaaaaaccattgaccataaa
135600
<----------
ID1
---------->
DOF2
--------->
ANAC58
<---------
AHL20(2)
<---------
ARR11(3)
--------->
AHL20(2)
--------->
YAB1
<---------
CCA1(2)
<---------
AHL20(1)
--------->
GLK1(1)
-------->
DOF2
--------->
AHL20(1)
<---------
GLK1(1)
----->
ANAC58
----------->
GT1
--------->
ANAC58
--------->
ANAC58
<-
----->
ANAC46
--------->
ARR14(2)
--------->
AHL20(2)
--------->
ANAC58
---------
----->
ANAC58
<---------
ARR14(2)
<---------
AHL20(2)
--------->
MYB52(1)
--------->
GLK1(2)
cgaaagacatatatctaagcgtttcggttctgagaaacagcaaaataaattcagacgaaaaagaacaaaaacggaaatcggaatcaaaattctatcatca
135700
--------->
MYB52(1)
<---------
DOF5.7(2)
--------->
ZAT14
--------->
ANAC58
<---------
DOF5.7(2)
--------->
ANAC58
--------->
MYB52(1)
<---------
At4g35610
<---------
WRKY12
----------->
HVH21
<-------
TEIL
--------->
ANAC46
<XXXXXXXXXXXXXXXXXXXX
MIR159C
<------
MYB83
--------->
CCA1(2)
<---------
ZAT14
--
<---------
ANAC55(2)
--------->
ARR14(1)
<---------
WRKY38(1)
<-
--------->
MYB46(2)
--------->
GLK1(2)
----------->
HVH21
<-
--------->
TOE1(3)
--------->
ARR11(1)
<---------
DEAR3(2)
<---
--------->
TOE2(3)
<---------
GLK1(2)
<------
MYB46(1)
--------
----------->
RAV1(2)
------->
GAMYB
<---------
ARR14(2)
<------
MYB83
<--------
-------->
P
--------->
MYB111(1)
--------->
ARR14(2)
<---------
DREB2C(2)
--------->
ANAC58
--------
MYB52(2)
<------
MYB46(1)
----------->
ARR10
<---------
DEAR3(1)
--------->
ANAC46
>
YAB1
--------->
MYB59
----------->
GT1
--------->
MYB52(1)
<---------
ANAC46
--------->
ANAC58
<
aactaacctgaaacgaagtaggtaacggcgagatagtaagattcggctaataaacggaagtcggtgaacggcgttttcttcaattcaagcaactggtccc
135800
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AGI:
At1g01340.1
Description:
ATCNGC10 (CYCLIC NUCLEOTIDE GATED CHANNEL 10); calmodulin binding / cyclic nucleotide binding / ion channel. Identical to Probable cyclic nucleotide-gated ion channel 10 (CNGC10) [Arabidopsis Thaliana] (GB:Q9LNJ0;GB:Q9LKL3); similar to ATCNGC13 (cyclic nucleotide gated channel 13), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT4G01010.1); similar to ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3) [Arabidopsis thaliana] (TAIR:AT2G46430.2); similar to ATCNGC3 (CYCLIC NUCLEOTIDE GATED CHANNEL 3), calmodulin binding / cyclic nucleotide binding / ion channel [Arabidopsis thaliana] (TAIR:AT2G46430.1); simi
Range:
from: 132328
to: 135322
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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