Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                        ----------->GT1                                                               <-----------HVH21   <---------GLK1(2)                                                     --------->CCA1(2)           <---------YAB1    <-                                      --------->At4g35610 <-------TEIL   --------->bZIP60(1)       --   --------->AtLEC2                  --------->GLK1(2)<-------TEIL       <---------bZIP60(1)       <-   agaacatgcagagtttgatgtcaaagtttacaactggagcatctgtatttgaaagatacatacagtgtcagtgtgtcatcatcttgattcttgtaaattg  95600                                                 --------->GLK1(1)                             <-----                                                 --------->CCA1(2)                            -------               <----------DOF2                  <---------GLK1(2)                            <-------    <---------AHL20(2)                          --------->ARR14(2)        ----------->GT1   <--------  <---------AHL20(2)                   --------->GLK1(2)             <---------ANAC58       <-------- <-----------------AGL3                --------->ARR11(3)            <---------ANAC58       <-------- ------->ARR11(3)                      <---------ARR11(3)            <---------ANAC46   <----------DOF2 --------AHL20(1)                     <---------GLK1(2)  --------->YAB1<---------ANAC46 ------>ZmHOX2a(1) ------->AHL20(1)           ---------->DOF2     <---------ARR14(2) <-----------HVH21<---------ARR11(3) --------ARR11(3) ----------->GT1 --------->At4g35610    --------->AHL20(2)     <XXXXXXXXXXXXXXXXXXXXMIR866-5P   atatatttttttgggacctttggaaaaaataaaagcagaagaatctttcagatttgcaattaaaaacgatgtcgtgtggtaaacaaaatcctttgcttga  95700                                                             <---------O2                                                      --------->ZAT2                         <------MYB46(1)              <---------ZAT2                         <---------MYB46(3)          ------>MYB46(1) ----WRKY18(1)           <------MYB83                ------>MYB83 ---->HVH21             <---------AtMYB61       --------->AtMYB61 --WOX13(1)            <--------P              --------->MYB46(3)       <-----------GT1 -ANAC58              <---------MYB52(1)     ------->GAMYB <---------ZAT14     ------>NtERF2 -AtLEC2        <---------ANAC58            --------->MYB46(3) ----------->HVH21<---------ANAC46  --- -ANAC58        <---------ANAC58         <---------WRKY12  --------->ZAT14  ----------->RAV1(2) -----   ccaagtcgttctcttcttgcttctggttggtttacttcatagttcaacgaccaccaagctgtgaagtgaccgtattacccctgcctggaatcaaggtcaa  95800          --------->GLK1(2)                       <---------MYB52(1)     --------->LBD16                             --------->At5g28300    --------->LBD16  <---------MYB46(3)          <-------GAMYB    --------->ANAC58 <------MYB46(1)            ----------->GT1          --------->At4g35610    --------->ANAC58 <------MYB83          --------->MYB52(1)     <---------ANAC46   <------NtERF2    <---------AtMYB61      ---------->DOF2      --------->MYB52(1)   <---------LBD16 <---------MYB52(1)      <---------DOF5.7(2) ----------->HVH21 --------->At4g35610 ------>DAG2    --------->SPL7   <---------ARR14(2)           <-----------HVH21  <---------At4g35610 ----->DOF2 <---------ICU4       --------->ARR14(2)       --------->GLK1(2)    --------->MYB46(3)   aaggccccggaaaatcagtacgttggtagcatttggatttggagataacgccgttaaaagactctgtaacgggtttgctcaacagctctctctagttcgt  95900                                                                  <---------ALFIN1                                                                ------>ZmHOX2a(2)                                                               <------ZmHOX2a(2)                                                              <---------ARR14(2)                                                         <-----------HVH21                                                         <-----------TGA1                                                        --------->bZIP60(1)                                                        <---------O2                                                        <---------bZIP60(1)                                                        --------->O2                                                        <---------TGA2(1)                                                        --------->TGA2(1)                                                       ----------->STF1                                              ------>MYB83--------->TGA2(2)                                              ------>MYB46(1)<---------At4g35610                                            <---------MYB59  --------->At4g35610                                       <---------DAG2 <---------TGA2(2)                                       <---------MYB59------>NtERF2                                       --------->TOE2(3)--------->TGA1a                             -                                       --------->TOE1(3)<---------TGA1a                           <--                                    <-----------GT1  ----------->TGA1                             <--                                  ================================bZIP_DOF              <-----------GT1                              <---------MYB52(1)     --------->WRKY12       <---------At4g35610   <--                            ----------->GT1--------->ANAC55(2)--------->ARR14(2) --------->ZAT6 <----                  --------->ANAC58<---------DAG2     ----------->HVH21 <---------MYB52(1)       -----                  --------->ANAC58<----------DOF2  <---------At4g35610<-----------HVH21*TSS    <-----   ttatcgaattagataatgccactccaaaaaacgttactttaccttacctatctcgctgacgtcagatcccaccgttagagcttacacttgtaacgccgtt  96000             --------->ANAC58             --------->ANAC46         <---------HSFB2a(2)         --------->HSFB2a(2) ----->ZmHOX2a(1) -------ANAC46 -------ANAC58                      --------->ZAT18 -------ANAC58                      --------->ZAT14                                                 - -----ARR14(2)            ---------->DOF2                                                           - ---->ARR14(2)    ----------->GT1   <---------ZAT14   ----------->GT1<---------ANAC58             --- ----MYB52(1)--------->ANAC58  <----------DOF2       >>>>>>>>>TBF1   <---------ANAC58          ------   tcctgcattttccacaagcaaggtaaaaaaaagctttgtgcagagagagagagaagaagaaaaatgggtttgcttacgaacaagattgagagagaagagc  96100          <------ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)        <---------GLK1(1)                                  <----------DOF2        --------->GLK1(1)                             --------->At5g28300      <------ZmHOX2a(1)                              ----------->GT1   <-----------RAV1(2)                              --------->ANAC58 -------->ANAC58                                    --------->ANAC58 -------->ANAC58                                    --------->ANAC46                        <-------- ------->DOF2                                     <---------ALFIN1<-------TEIL          <----------DOF2 --->At4g35610                            --------->KAN4(2)--------->TOE2(3) <---------TOE1(2)   taaagccaggagatcacatctatacttacagagcaatcttcgcttattctcaccacggtaactttagattcattcttcccaagtttgctcctttctttct  96200                      ----------->GT1                                 <------MYB83                     --------->DAG2                                   <---------DEAR3(2)                    ---------->DOF2                                   <------MYB46(1)               --------->TOE2(3)                                      ----------->GT1         --------->YAB1                        <----------DOF2        <---------MYB46(3)         <---------ICU4                --------->AtLEC2              <---------DEAR3(1)      --------      --------->WOX13(1)           ------>ZmHOX2a(1)                <---------ORA47(1)      --------- --DOF2 <---------ATHB12          --------->TOE2(3) <----------DOF2 <--------P    <---------YAB1   cgttcattcaatcataacatcaaaaagtgaaattatcctcaatgcaagtcttttcttttagtttctactggtcggtttaatcttcttattgaaactgtaa  96300                                    <<<<<<<<<<<<<<<<<LFY              ------>MYB83                            <---------ARR11(3)                        ------>MYB46(1)                            <---------AGP1                          <---------MYB59                            --------->AGP1                       <---------WRKY18(1)                            --------->ARR11(3)                  ----------->HVH21               <----------DOF2------>ZmHOX2a(2)               <---------ANAC58         <---------DOF5.7(2)<---------ARR14(2)                <---------AtLEC2   ---------->DOF2          --------->ARR14(2)                <---------ANAC58 ->At5g28300   <---------DAG2<------ZmHOX2a(2)           <---------ICU4       ----------->RAV1(2) -->GT1 --------->WRKY12  ----------->ARR10             <---------ATHB12   <-----------GT1     <-----   attcacaaagttgacgactttatctagatagatcttgaagacaatggtctatattccaatctttgcatgacctaatttcaccctggctctgtattttgat  96400                    ------>ZmHOX2a(2)                   --------->GLK1(1)          <---------ARR11(3)          <---------ARR14(2)          --------->ARR14(2)          --------->ARR11(3)          <---------ARR11(1)          <-----------ARR10    <----------DOF2                    <-----------GT1         <---------CCA1(2)   ------->TEIL             ----------->HVH21       --------->YAB1     <---------WOX13(1)      <---------AHL20(2)          ------>ZmHOX2a(1) ----TOE2(3)       <---------GLK1(1)      <---------YAB1       <---------AHL20(2)                   <   gttattccatcatatcttctgatctctgatggactttatagatgatttttgtttatttgacatatttttatcccaatttcctctggtgatgaagaattga  96500  Previous    Next  AGI:  At1g01220.1    Description:  GHMP kinase-related. similar to hypothetical protein OsI_009504 [Oryza sativa (indica cultivar-group)] (GB:EAY88271.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66976.1); similar to hypothetical protein OsJ_008832 [Oryza sativa (japonica cultivar-group)] (GB:EAZ25349.1); contains InterPro domain Ribosomal protein S5 domain 2-type fold (InterPro:IPR014721); contains InterPro domain Mevalonate and galactokinase; (InterPro:IPR006206); contains InterPro domain GHMP kinase, C-terminal (InterPro:IPR013750); contains InterPro domain L-fucokinase (InterPro:IPR012887); contains InterPro domain GHMP kinase; (InterPro:IPR006204) Range:  from: 91750    to: 95651    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g01225.1    Description:  NC domain-containing protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G00905.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66977.1); contains InterPro domain NC (InterPro:IPR007053) Range:  from: 95987    to: 97407    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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