Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------HSFB2a(1)                                                                           <---------GLK1(1)                                                                          <-----------ARR10                                                                 <---------ATERF1(1)                                                                --------->DEAR3(1)                                                              <---------ATERF1(1)                                                              --------->LBD16                                                             --------->TOE2(2)                                                             --------->TOE1(2)                                                   <---------ANAC46       --------->GLK1(2)                                                 <---------MYB46(3)       --------->ARR14(2)  <------ ----------------------ANAC81                    --------->MYB55(2)      <---------GLK1(2)  --------- --ICU4                                         <---------AtMYB61------>NtERF2             <---------LBD16 ->ATHB12      <---------MYB52(1)            <---------DEAR3(1)--------->RAP2.3(1) --------->ZAT14 -YAB1    <-----------GT1               ----------->ARR10  --------->MYB52(1)   --------->LBD16<----- >ICU4  <-----------GT1   ---------->DOF2  --------->CCA1(2)--------->DEAR3(2)<---------LBD16--------   ggttttcatttttctctgtttttttaaaaaaagaagagagagaagagacggtggtttagaaaaccggcgactcaagaatctccggtgaagtcttccggta  52500                                                                                               ======                                                                                               ------                                                                                              -------                                                                                     ------>NtERF2                                                                                    --------->RRTF1(3)                                                                                    --------->RAP2.3(2)                                                                                    --------->DREB2C(2)                                                                                    --------->ANAC46                                                                                    --------->RRTF1(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->RAP2.6(2)                                                                                    --------->DEAR3(1)                                                                                   --------->ERF1                                                                                   --------->ORA47(2)                                                                                   --------->RRTF1(1)                                                                                   --------->ATERF1(1)                                                                                   <------NtERF2<----                                                                                   --------->RAP2.6(1)                                                                                   --------->RAP2.3(1)                                                                                  ------>NtERF2======                                                                                  <---------RRTF1(1)                                --------->TOE1(3)                     --------->ANAC55(2) <---------MYB55(2)                                --------->TOE2(3)                     --------->ANAC58 --------->DEAR3(1)                              <---------TOE1(3)                       --------->ANAC55(1) --------->MYB46(3)                     --------->ARR14(2)                               <---------ANAC55(2)--------->AtLEC2                     <---------ARR14(2)                               --------->ANAC46--------->ATERF1(1)       --------->ANAC58       <---------TOE2(3)                --------->DEAR3(1) <---------ATERF1(1)       --------->ANAC58   --------->ANAC55(2)              <---------ABI4(2)      <---------RAP2.3(1)      --------->AtMYB61<-------TEIL                        <---------ZAT2        --------->ANAC46 ---   --------->ANAC46----------->ARR10                       <---------ZAT14       --------->DEAR3(1) ---MYB52(1)     <------ZmHOX2a(1)                         <---------At4g35610   <---------DEAR3(1) >HSFB2a(2)   <-----------RAV1(2)                          --------->At4g35610--------->ANAC46------- ----CCA1(2)  <---------LBD16--------->MYB52(1)     --------->LBD16   --------->ANAC58<------NtERF2 ->LBD16 <---------ALFIN1 --------->ANAC46        <---------LBD16  --------->ARR14(2)<---------ATERF1(1)   tctctccaccagcacctcaggaagattcacttaacgtaaactcaaaaccctctccggagacagcaccgagttacgcaactacgacgccgccatccaacgc  52600                                  --------->TGA2(2)                                 <-----------HVH21                                --------->bZIP60(2)                                --------->ANAC46                                --------->bZIP60(1)                                <---------bZIP60(1)               --------->DEAR3(1)<-----------TGA1         <---------SPL7         <---------O2         <-----------HVH21      --------->TGA1a                         --------->ANAC55(2)        --------->DEAR3(1)      <---------TGA1a                         --------->ANAC58 ---------->DOF2     <---------ZAT18 <---------At4g35610          --------->ICU4 =================bZIP_DOF      --------->O2                      --------->AHL20(2) =========================================bZIP_DOF              <---------ARR14(2) =================MYC_MYB       --------->ANAC58                --------->ARR14(2)            <------ ->GAMYB--------->TGA1a <---------ALFIN1                       <------NtERF2                 <------- -->DEAR3(1) <------NtERF2      --------->ANAC58        --------->DEAR3(1)                 --------->At4g35610 -----LBD16  ------>NtERF2      <<<<<<<<<<AtbZIP1  --------->ANAC58     --------->ANAC58   <---------ZAT2 =========================================MYC_MYB  --------->ANAC58     --------->ANAC46<---------At4g35610 ------>LBD16--------->LBD16   ------>NtERF2--------->ANAC46 <---------ANAC46        <-----------GT1 -->ANAC46 --------->SPL7     <---------ALFIN1     --------->ANAC46     <---------ANAC55(2)<---------At4g35610   cggtaaacccccgtccgccgtagtccccatcgccacgtcagcatctaagacactcgcaccgaggcggatttattacgcaagagaaaattacgctgctgtt  52700                                    --------->AHL20(2)                                    --------->ATHB51                                    <---------ICU4                                    <--------HAHB4                                    -------->ATHB1                                   --------->ICU4                                   <---------ATHB51                          <------MYB46(1)                     <---------RVE1(1)                     <---------GLK1(1)                     <---------CCA1(1)                    --------->ARR11(3)                                     -------->P                    <---------ARR11(3)                                     ------>MYB83             <                    --------->ARR14(2)  <---------ICU4                     ------>MYB46(1)   <-------                    <---------ARR14(2)  --------->YAB1           --------->AHL20(2)  <---------HSFB2a(2)                   <------ZmHOX2a(1)--------->YAB1               <---------AHL20(2)  --------->HSFC1(1)                <---------At4g35610<---------ATHB12       <----------DOF2------->GAMYB   <---------ZAT18 -GAMYB    <----------DOF2<------MYB83<---------YAB1   <-----------GT1  --------->MYB46(3)   <------- ----RAV1(1)<-----------HVH21      <---------YAB1  <---------AHL20(2) <-----------GT1--------->HSFB2a(2)   gtcatccagacttctttcagaggatatttggtgagcaattattaatgacctatatttttactttcatttttttaaccaacttgacttctagaccactttt  52800                                                     -------->P                                                    <-----------GT1                                                  --------->CCA1(2)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                       <---------ANAC46          <------------CBF                                       <---------ANAC58    <---------AHL20(2)           --------->ALFIN1            <---------ANAC58    --------->AHL20(2)           <---------ANAC58        <------------CBF------>ZmHOX2a(2)           <---------ANAC58      <---------YAB1  <---------ARR11(3)      --------->ICU4             <---------TOE2(3)<------ZmHOX2a(2)                     <---------AHL20(2)      <---------ATHB12          <-----------GT1  <-----------ARR10                     --------->AHL20(2)  ------------>CBF         --------->AHL20(2)    --------->ARR11(3)     <---------GLK1(1) ---------ZAT6             <---------AHL20(2)    --------->AGP1 --------->ATHB12       <---------AHL20(1) --DAG2--------->YAB1     --------->AHL20(2)     <---------ARR14(3)     --------->GLK1(1) ---DOF2 <---------ANAC46----------->TBP         --------->ARR14(3)  *TSS              <---------AHL20(2)   tagtgacaatgatgtgtgtctatgtctataaaattaacattgcttatacaagatctaccatttaaaagattgggatttcatttagataatttttttttgg  52900                            <------MYB83                            <------MYB46(1)                           --------->MYB59                                    --------->ANAC58                    <-----------------AGL1                                    --------->ANAC58                    <-----------------AG                          --------->MYB52(2)    --------->ALFIN1                  <----------DOF2                               <--------P    --------->ANAC46               ---------->ID1   --------->DAG2            ---------->DOF2 --------->CCA1(2)   gtcttgatataagttttgttctttctaatttggtaaggcaagaagagcattaagagcattaaaagggttagtgaagctacaagcattggtgaggggacat  53000                                                                           --------->ANAC58                                                                  <---------AtLEC2                                                                  <---------ANAC58                                                                  <---------ANAC58                                                               <---------ZAT18                                                            <---------O2  ------>MYB46(1)                                                            --------->O2  ------>MYB83                                                            <---------ANAC58                                                            <---------ANAC58                                                            --------->TGA1a--------->ANAC46        --                                                            <---------TGA1a--------->ANAC58        <-                                       <---------ZAT2<---------ZAT18     --------->MYB52(1)      <---           --------->ANAC58           --------->ANAC58      <---------ANAC46------->GAMYB      <<<<<<           --------->ANAC58           --------->ANAC58      ========================MYC_MYB   -------       --------->ANAC58       --------->ALFIN1       --------->ZAT14    --------->AtMYB61    --------       --------->ANAC58    <---------TOE1(3)         <---------ZAT14   --------->MYB46(3)   ---------     ---------->DOF2       <---------TOE2(3)         --------->ZAT18 <---------WRKY18(1)    ---------   aatgtgagaaagcaagctaaaatgacattaaggtgtatgcaagctctggttcgagtccagtctcgtgtgcttgaccaacgcaaacgcttgtctcatgacg  53100                                                                         --------->ANAC58       <---------ARR14(2)                                                --------->ANAC58       --------->ARR14(2)                                           <---------ETT(2)      <---------GLK1(1)                                            <------ZmHOX2a(2)      --------->GLK1(1)                                            ================================== ------->MYB52(2)                                                 <---------ARR14(2) --------MYB46(3)                                                 --------->AGP1 ------MYB52(1)                                                   --------->ARR14(2) <<<<AtTINY2                                                     --------->At4g35610 -->RAP2.6(3)               --------->ANAC58                 <-----------HVH21 ->MYB52(1)    <---------ZAT14          ------->TEIL     <---------ARR11(3)                         < -->TGA1   --------->LBD16  --------->ANAC58             --------->ARR14(2)                         < -->HVH21<---------LBD16    --------->ANAC46             <---------ARR14(2)      <--------P    ------   gtagtcgcaaatccgcgttcagtgactctcacgctgtttttgaatctcgctatcttcaagatttgtcagatcgacaatccatggttagtatagcctccta  53200                                                                                                    -                                                                                  <---------At4g35610                                                                       --------->YAB1               < =HOX2a_HOX2a                                             <----------DOF2   ----------->GT1        <- ---------ANAC58                                          <---------DAG2   <---------TOE2(3) <------- ---------ANAC58                                         <---------ANAC58  <---------TOE1(3) <------- >ZmHOX2a(1)    --------->YAB1                           <---------ANAC58  --------->DAG2 <----------   ggccttgcctaaactatagcataatcaattgatatgttttttagttatagacatgttttgctttttagtttattcataaggttaagctgtttttagcatg  53300                                           <-----------GT1 --------->STY1(2)                      <---------ICU4 -------->ARR14(2)                     <---------YAB1                                    --------->ANAC46 ---------ARR14(2)                  --------->ICU4                                       --------->ANAC58 --------CCA1(2)                  <---------ANAC58     <---------TOE1(2)                 --------->ANAC58 --ANAC58       <---------ZAT18   <---------ANAC46     <---------TOE2(3)             <----------DOF2 --ANAC58       <-------TEIL --------->ALFIN1 <----------DOF2                      <---------ATHB12 -GT1       <-----------RAV1(1)   <---------ANAC58     <---------TOE2(2)      <-----------GT1 -------   cctatctagttcaaatggtgcattcacataggtgtgccttgattatttctttactcttaggtatacatattttgtatatttttcaatctttaagcaattc  53400  Previous    Next  AGI:  At1g01110.1    Description:  IQD18 (IQ-domain 18). similar to IQD17 (IQ-domain 17), calmodulin binding [Arabidopsis thaliana] (TAIR:AT4G00820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24314.1) Range:  from: 52869    to: 54685    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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